Browse of TCMCG007C42587 protein

CDS

Accession Number	TCMCG007C42587
gbkey	CDS
Protein Id	XP_009103151.2
Location	complement(join(12875439..12875534,12875687..12875788,12875891..12876066,12876153..12876398,12876485..12876741,12876850..12876954,12877196..12877323,12877447..12877542,12877629..12877751,12877873..12877927,12878043..12878206,12878291..12878381,12878626..12878780,12879351..12879530,12879793..12879966,12880077..12880218,12880483..12880785,12880911..12880942))
Gene	LOC103829252
GeneID	103829252
Organism	Brassica rapa

Protein

Length	874aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA249065
db_source	XM_009104903.3
Definition	AP-1 complex subunit gamma-1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category	U
Description	AT1G23900 (E 0.0) GAMMA-ADAPTIN 1, Gamma-ADR GAMMA-ADAPTIN 1 (GAMMA-ADAPTIN 1)
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko04131        [VIEW IN KEGG]
KEGG_ko	ko:K12391        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04142        [VIEW IN KEGG] map04142        [VIEW IN KEGG]
GOs	GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005794        [VIEW IN EMBL-EBI] GO:0005798        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0012505        [VIEW IN EMBL-EBI] GO:0012506        [VIEW IN EMBL-EBI] GO:0012510        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016192        [VIEW IN EMBL-EBI] GO:0030117        [VIEW IN EMBL-EBI] GO:0030118        [VIEW IN EMBL-EBI] GO:0030119        [VIEW IN EMBL-EBI] GO:0030120        [VIEW IN EMBL-EBI] GO:0030121        [VIEW IN EMBL-EBI] GO:0030125        [VIEW IN EMBL-EBI] GO:0030130        [VIEW IN EMBL-EBI] GO:0030131        [VIEW IN EMBL-EBI] GO:0030133        [VIEW IN EMBL-EBI] GO:0030135        [VIEW IN EMBL-EBI] GO:0030136        [VIEW IN EMBL-EBI] GO:0030140        [VIEW IN EMBL-EBI] GO:0030658        [VIEW IN EMBL-EBI] GO:0030659        [VIEW IN EMBL-EBI] GO:0030660        [VIEW IN EMBL-EBI] GO:0030662        [VIEW IN EMBL-EBI] GO:0030665        [VIEW IN EMBL-EBI] GO:0031090        [VIEW IN EMBL-EBI] GO:0031410        [VIEW IN EMBL-EBI] GO:0031982        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044425        [VIEW IN EMBL-EBI] GO:0044431        [VIEW IN EMBL-EBI] GO:0044433        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0048475        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0097708        [VIEW IN EMBL-EBI] GO:0098588        [VIEW IN EMBL-EBI] GO:0098796        [VIEW IN EMBL-EBI] GO:0098805        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGAATCCCTTCTCTTCCAGTACTCGTCTAAGGGACATGATCAGATCCATAAGAGCTTGCAAAACAGCTGCGGAGGAGCGTGGCGTTGTGAGAAAAGAGTGTGCTGATATCAGAGCATCTATCAACGAGAATGACCCTCATGATAGGCACCGGAACCTCGCTAAGCTCATGTTCATACACATGCTTGGTTACCCTACGCACTTTGGGCAGATGGAGTGCTTGAAGCTTATTGCGTCTCCGGGGTTTCCAGAGAAGAGGATTGGTTATTTAGGGTTGATGTTGCTTCTTGATGAGAGACAAGAAGTCTTGATGCTCGTCACTAACTCATTGAAACAAGATCTTAACCACACGAACCAGTATGTTGTAGGACTCGCGCTCTGTGCTCTAGGGAATATTTGTTCTGCAGAAATGGCGCGTGATCTTGCGCCGGAAGTAGAAAGGTTGATCCAGTTTCGTGACCCTAATATACGTAAAAAGGCGGCACTTTGCTCCACTAGAATAGTAAGGAAAGTTCCAGATCTTGCGGAGAACTTTATAAATGCTGCTTCCTCCTTGCTTAAAGAAAAGCATCATGGGGTTCTTATAACAGGAGTTCAACTTTGTTATGAACTATGCACGATCAATGATGAGGCCCTAGAATTCTTCAGGAAGAAATGCACGGAGGGGCTGATAAAAACTCTGAGGGATATTACAAATAGCGCATATCAGCCTGAGTATGATGTTGCAGGGATCACAGACCCTTTTTTACACATACGGTTACTTAAGCTCCTGCGTGTTTTAGGCCACGGTGACGCCGATGCTAGTGATTTGATGACTGATATACTTGCCCAGGTGGCAACAAAAACTGAATCAAACAAGAACGCAGGAAATGCCGTACTCTATGAGTGTGTTGAAACAATCATGGCCATTGAAGACACCAGTAGCTTGCGGGTGCTTGCTATCAATATCTTGGGAAGATTCTTGTCTAACCGTGACAATAATATCAGATATGTTGCATTAAACATGCTGATGAAAGCAATCGCTTTTGATGATCAAGCAGTGCAAAGGCACAGAGTTACAATCTTGGAATGTGTTAAGGATCCAGATGCTTCTATCCGGAAAAGAGCTCTTGAACTCGTCTCTCTTTTGGTGAATGAGAATAATGTCAAACAACTGACAAAGGAGCTAATTGATTATTTGGAAATCAGCGATGAAGATTTTAAGGAGGATCTTAGTGCAAAAATTTGTTCTATCGTTGAGAAGTTTTCTCCAGAGAAAATCTGGTACATTGATCAGATGCTCAAGGTTCTGTCTGAGGCTGGAAAGTTTGTGAAAGATGATGTGTGGCATGCTCTGATTGTTGTCATAACCAATGCATCAGAGCTTCATGGGTATACAGTCAGAGCATTATACAACGCTGTCTTGACATATTCGGAACAGGAGACCCTTGTCCGAGTGGCCATATGGTGCATTGGGGAATATGGTGATTTGTTGGTCAACAATGTGGGGATGCTTGGCATTGAAGATCCAATAACGGTAACGGAATGTGACGCAGTGGACGTTATCGTTGATGCCATTACTCGCCATAACTCAGATATGACTACAAAAGCGATGGCATTGGTTGCTCTACTGAAGCTGTCATCTCGATTTCCTTCTATCTCAGAGAGAATTAAAGATGTAATTTTGAAGCAGAAAGGGAGCCTTCTCCTTGAAATGCAGCAGAGAGCTATTGAGTTCAATTCTATCGTTGAGAGGCATAAAAATATCAGGTCTTCCCTGGTTGAGAGAATGCCAGTGCTAGATGAGGCTACCTTCAATGTGCGGAGGGCTGGCTCTTTGCCTGCGTCAGTTACAACAATGGCCAAGCCTTCTGTTAGTATTCCAAATGGTGTTTCTGCAGCTCCACTAGTGGACTTGCTGGACCTGGGTTCTGACGATATATTGGCTGCACCTAGTAGTTCATCTGGTGCAGATTTCCTTCAGGATCTTCTCGGTGTTGACTTAGGATCATCATCAGCACAATCTGGTGCAACCCCAGCTCCTAAAGCCGGCACAGATCTGTTGCTGGATATTCTATCAATTGGGACCCCTTCTCCGGCACAAAACAGCACATCAGCAATTGATTTGTTATCAACAGCCGACATGAACAATAATTCTTCTACTGCGCTAGACACACTTTCTTCATCAGCTCCACCTCACATAGCAACTACCGCGTCTGCTGGTGGTATGTTTGATTTGTTAGATGGCCTTTCTCCAAGTCCATCAAAGGAAGCAACCAATGGTCCAGCATATCCACCTATTGTTGCATACGAGAGCAGCTCCTTGAAGATTGAATTCACTTTCTCAAAGCCATCAGGGAACCCACAAACAACAAACGTCGAGGCCACTTTTATAAACTTATCTCCTAATACTTTCACTGATTTTGTCTTCCAGGCAGCTGTTCCAAAGTTCCTCCAGCTGCACTTGGATCCAGCTAGCAGTAACACACTCCCGGCAAACGGTGGTAAGGTAACGCAGAATCTGAGAGTCACTAACAGCCAGCACGGGAAGAAATCTCTTGTGATGCGCATGAGGATTGGGTACAAAGTGAACGGAAAAGATGTATTGGAGGAAGGACAAATCAACAACTTCCCTCGTGGGTTGTGA

Protein:   MNPFSSSTRLRDMIRSIRACKTAAEERGVVRKECADIRASINENDPHDRHRNLAKLMFIHMLGYPTHFGQMECLKLIASPGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHTNQYVVGLALCALGNICSAEMARDLAPEVERLIQFRDPNIRKKAALCSTRIVRKVPDLAENFINAASSLLKEKHHGVLITGVQLCYELCTINDEALEFFRKKCTEGLIKTLRDITNSAYQPEYDVAGITDPFLHIRLLKLLRVLGHGDADASDLMTDILAQVATKTESNKNAGNAVLYECVETIMAIEDTSSLRVLAINILGRFLSNRDNNIRYVALNMLMKAIAFDDQAVQRHRVTILECVKDPDASIRKRALELVSLLVNENNVKQLTKELIDYLEISDEDFKEDLSAKICSIVEKFSPEKIWYIDQMLKVLSEAGKFVKDDVWHALIVVITNASELHGYTVRALYNAVLTYSEQETLVRVAIWCIGEYGDLLVNNVGMLGIEDPITVTECDAVDVIVDAITRHNSDMTTKAMALVALLKLSSRFPSISERIKDVILKQKGSLLLEMQQRAIEFNSIVERHKNIRSSLVERMPVLDEATFNVRRAGSLPASVTTMAKPSVSIPNGVSAAPLVDLLDLGSDDILAAPSSSSGADFLQDLLGVDLGSSSAQSGATPAPKAGTDLLLDILSIGTPSPAQNSTSAIDLLSTADMNNNSSTALDTLSSSAPPHIATTASAGGMFDLLDGLSPSPSKEATNGPAYPPIVAYESSSLKIEFTFSKPSGNPQTTNVEATFINLSPNTFTDFVFQAAVPKFLQLHLDPASSNTLPANGGKVTQNLRVTNSQHGKKSLVMRMRIGYKVNGKDVLEEGQINNFPRGL